List of Publications (Updated July 28, 2014)

Sou, I. M., Calantoni, J., Reed, A. H. and Furukawa, Y. 2014. Initiation of erosion in unidirectional flow using a synchronized imaging technique. Journal of Visualization July 2014.

Furukawa, Y., Reed, A. H. and Zhang, G. 2014. Effect of organic matter on estuarine flocculation: a laboratory study using montmorillonite, humic acid, xanthan gum, guar gum and natural estuarine flocs. Geochemical Transactions DOI: 10.1186/1467-4866-15-1.

Tan, X, Hu, L., Reed, A. H., Furukawa, Y. and Zhang, G. 2013. Flocculation and particle size analysis of expansive clay sediments affected by biological, chemical, and hydrodynamic factors. Ocean Dynamics DOI: 10.1007/s10236-013-0664-7.

Zhang, G., Yin, H., Lei, Z., Reed, A. H. and Furukawa, Y. 2013. Effects of exopolymers on particle size distributions of suspended cohesive sediments. Geophysical Research Letters – Oceans DOI: 10.1002/jgrc.20263.

Furukawa, Y. and Dale, J. D. 2013. The surface properties of Shewanella putrefaciens 200 and S. oneidensis MR-1: the effect of pH and terminal electron acceptors. Geochemical Transactions 14: 3.

Kim, J., Furukawa, Y., Curry, K. J. and Bennett, R. H. 2012. Role of Chitin in Montmorillonite Fabric: Transmission Electron Microscope Observations. Clays and Clay Minerals 60, 89-98.

Tan, X., , Zhang, Z., , Yin, H., Reed, A. H. and Furukawa, Y. 2012. Characterization of particle size and settling velocity of cohesive sediments affected by a neutral exopolymer. International Journal of Sediment Research 27, 473-485.

Wang, G., Ma, P., Zhang, Q., Lewis, J., Lacey, M., Furukawa, Y., O’Reilly, S. E., Meaux, S., McLachlan, J. and Zhang, S. 2012. Endocrine disrupting chemicals in New Orleans surface waters and Mississippi Sound sediments. Journal of Environmental Monitoring.

Furukawa, Y. and Watkins, J. L. 2012. Effect of organic matter on the flocculation of colloidal montmorillonite: A modeling approach. Journal of Coastal Research 28.

Robertson, K., Furukawa, Y., Underwood, A., Black, L. and Liu, J. 2012. Deletion of the Hoc and Soc capsid proteins affects the surface and cellular uptake properties of bacteriophage T4 derived nanoparticles. Biochemical and Biophysical Research Communications.

Keen, T. R., Slingerland, R. L., Bentley, S. J., Furukawa, Y., Teague, W. J. and Dykes, J. D. 2012.  Sediment transport on continental shelves: storm bed formation and preservation in heterogeneous sediments. In: Sediments, Morphology and Sedimentary Processes on Continental Shelves: Advances in technologies, research and applications (Special Publication 44 of the IAS). Wiley-Blackwell.

Tan, X., Yin, H., Zhang, G., Reed, A. H. and Furukawa, Y. 2011. Influence of a natural exopolymer on the particle size and settling velocity of cohesive sediments. RCEM 2011.

Furukawa, Y., Watkins, J. L., Kim, J., Curry, K. J., and Bennett, R. H., 2009. Aggregation of montmorillonite and organic matter in aqueous media containing artificial seawater. Geochemical Transactions 10.

Furukawa, Y. and O’Reilly, S. E., 2007. Rapid precipitation of amorphous silica in experimental systems with nontronite (NAu-1) and Shewanella oneidensis MR-1. Geochimica et Cosmochimica Acta 71, 363-377.

Keen, T. R., Furukawa, Y., Bentley, S. J., Slingerland, R. L., Teague, W. J., Dykes, J. D., and Rowley, C. D., 2006. Geological and oceanographic perspectives on event bed formation during Hurricane Katrina. Geophysical Research Letters 33.

Brunner, C. A., Beall, J. M., Bentley, S. J., and Furukawa, Y., 2006. Hypoxia hotspots in the Mississippi Bight. Journal of Foraminiferal Research 36, 95-107.

Furukawa, Y., 2005. Biogeochemical consequences of macrofaunal activities. In: Kristensen, E., Kostka, J. E., and Haese, R. Eds.), Interactions between macro- and microorganisms in marine sediments. , American Geophysical Union, Washington , D. C.

O’Reilly, S. E., Watkins, J., and Furukawa, Y., 2005. Secondary mineral formation associated with respiration of nontronite, NAu-1 by iron reducing bacteria. Geochemical Transactions 6, 67-76.

Keen, T. R. and Furukawa, Y., 2005. A modular entrainment model for cohesive sediment. Seventh International Conference on Cohesive Sediment Transport Processes. InterCoh, Gloucester Point, Virginia.

Boudreau, B. P., Algar, C., Johnson, B. D., Croudace, I., Reed, A., Furukawa, Y., Dorgan, K. M., Jumars, P. A., Grader, A. S., and Gardiner, B. S., 2005. Bubble growth and rise in soft sediments. Geology 33, 517-520.

Kim, J. W., Furukawa, Y., Dong, H. L., and Newell, S. W., 2005. The effect of microbial Fe(III) reduction on smectite flocculation. Clays and Clay Minerals 53, 572-579.

Furukawa, Y., Smith, A. C., Kostka, J. E., and Alexander, C. R., 2004. Quantification of macrobenthic impacts on diagenesis using a multicomponent inverse model in salt marsh sediments. Limnology & Oceanography 49, 2058-2072.

Kim, J. W., Furukawa, Y., Daulton, T. L., Lavoie, D., and Newell, S. W., 2003. Characterization of microbially Fe(III)-reduced nontronite: Environmental cell-transmission electron microscopy study. Clays and Clay Minerals 51, 382-389.

Viollier, E., Rabouille, C., Apitz, S. E., Breuer, E., Chaillou, G., Dedieu, K., Furukawa, Y., Grenz, C., Hall, P., Janssen, F., Morford, J. L., Poggiale, J. C., Roberts, S., Shimmield, T., Taillefert, M., Tengberg, A., Wenzhofer, F., and Witte, U., 2003. Benthic biogeochemistry: state of the art technologies and guidelines for the future of in situ survey. Journal of Experimental Marine Biology and Ecology 285, 5-31.

Furukawa, Y., Kim, J. W., Watkins, J., and Wilkin, R. T., 2002. Formation of ferrihydrite and associated iron corrosion products in permeable reactive barriers of zero-valent iron. Environmental Science & Technology 36, 5469-5475.

Furukawa, Y., Bentley, S. J., and Lavoie, D. L., 2001. Bioirrigation modeling in experimental benthic mesocosms. Journal of Marine Research 59, 417-452.

Lavoie, D., Watkins, J., and Furukawa, Y., 2001. Microwave processing of sediment samples. In: Giberson, R. T. and Demaree, R. S. J. Eds.), Microwave Techniques and Protocols.

O’Reilly, S. E., Furukawa, Y., and Newell, S., 2006. Dissolution and microbial Fe(III) reduction of nontronite (NAu-1). Chemical Geology 235, 1-11.

Furukawa, Y., Bentley, S. J., Shiller, A. M., Lavoie, D. L., and Van Cappellen, P., 2000. The role of biologically-enhanced pore water transport in early diagenesis: An example from carbonate sediments in the vicinity of North Key Harbor, Dry Tortugas National Park, Florida. Journal of Marine Research 58, 493-522.

Furukawa, Y., 2000. Energy-filtering transmission electron microscopy (EFTEM) and electron energy-loss spectroscopy (EELS) investigation of clay- organic matter aggregates in aquatic sediments. Organic Geochemistry 31, 735-744.

Bentley, S. J., Furukawa, Y., and Vaughan, W. C., 2000. Record of event sedimentation in Mississippi Sound. Transactions—Gulf Coast Association of Geological Societies 50, 715-723.

Furukawa, Y., Lavoie, D., and Stephens, K., 1997. Effect of biogeochemical diagenesis on sediment fabric in shallow marine carbonate sediments near the Dry Tortugas, Florida. Geo-Marine Letters 17, 283-290.

Furukawa, Y. and Barnes, H. L., 1996. Reactions forming smythite, Fe9S11. Geochimica et Cosmochimica Acta 60, 3581-3591.

Furukawa, Y. and Barnes, H. L., 1995. Reactions forming pyrite from precipitated amorphous ferrous sulfide. In: Vairavamurthy, M. A. and Schoonen, M. A. A. Eds.), Geochemical Transformations of Sedimentary Sulfur.

Furukawa, Y., 1994. Reactions forming smythite, Fe9S11. Doctoral, Pennsylvania State University, University Park, University Park, PA.

Kubo, T., Uchida, E., Furukawa, Y., and Imai, N., 1992. Experimental study on ion exchange equilibria between ilmenite solid solution (Fe2+, Mn2+, Mg2+)TiO3, and aqueous (Fe2+, Mn2+, Mg2+)Cl2 solution. Journal of the Mineralogical Society of Japan 21, 59-67.

Yoko Furukawa, PhD, Geochemist